Tools

tl.kde_filter(adata_tmp, score_name[, ...])	Filter spatial transcriptomics (ST) data using Kernel Density Estimation (KDE).
tl.dbscan_filter(adata_tmp[, eps, min_samples])	Perform DBSCAN clustering on spatial coordinates in an AnnData object.
tl.Cluster([n_clusters, covariance_type, ...])	Cluster cells or spots based on features.
tl.ClusterAutoK(n_clusters[, max_runs, ...])	Identify the best candidates for the number of clusters.